Line data Source code
1 : !=======================================================================
2 : ! Indices and flags associated with the tracer infrastructure.
3 : ! Grid-dependent and max_trcr-dependent arrays are declared in ice_state.F90.
4 : !
5 : ! author Elizabeth C. Hunke, LANL
6 :
7 : module icepack_tracers
8 :
9 : use icepack_kinds
10 : use icepack_parameters, only: c0, c1, puny, rhos, rsnw_fall, rhosnew
11 : use icepack_parameters, only: snwredist, snwgrain
12 : use icepack_warnings, only: warnstr, icepack_warnings_add
13 : use icepack_warnings, only: icepack_warnings_setabort, icepack_warnings_aborted
14 :
15 : implicit none
16 :
17 : private
18 : public :: icepack_compute_tracers
19 : public :: icepack_init_tracer_flags
20 : public :: icepack_query_tracer_flags
21 : public :: icepack_write_tracer_flags
22 : public :: icepack_init_tracer_indices
23 : public :: icepack_query_tracer_indices
24 : public :: icepack_write_tracer_indices
25 : public :: icepack_init_tracer_sizes
26 : public :: icepack_query_tracer_sizes
27 : public :: icepack_write_tracer_sizes
28 :
29 : !-----------------------------------------------------------------
30 : ! dimensions
31 : !-----------------------------------------------------------------
32 : integer (kind=int_kind), parameter, public :: &
33 : max_iso = 3 , & ! maximum number of isotopes ! LCOV_EXCL_LINE
34 : nmodal1 = 10 , & ! dimension for modal aerosol radiation parameters ! LCOV_EXCL_LINE
35 : nmodal2 = 8 , & ! dimension for modal aerosol radiation parameters ! LCOV_EXCL_LINE
36 : max_algae = 3 , & ! maximum number of algal types ! LCOV_EXCL_LINE
37 : max_dic = 1 , & ! maximum number of dissolved inorganic carbon types ! LCOV_EXCL_LINE
38 : max_doc = 3 , & ! maximum number of dissolved organic carbon types ! LCOV_EXCL_LINE
39 : max_don = 1 , & ! maximum number of dissolved organic nitrogen types ! LCOV_EXCL_LINE
40 : max_fe = 2 , & ! maximum number of iron types ! LCOV_EXCL_LINE
41 : max_aero = 6 , & ! maximum number of aerosols ! LCOV_EXCL_LINE
42 : max_nbtrcr = max_algae*2 & ! algal nitrogen and chlorophyll ! LCOV_EXCL_LINE
43 : + max_dic & ! dissolved inorganic carbon ! LCOV_EXCL_LINE
44 : + max_doc & ! dissolved organic carbon ! LCOV_EXCL_LINE
45 : + max_don & ! dissolved organic nitrogen ! LCOV_EXCL_LINE
46 : + 5 & ! nitrate, ammonium, silicate, PON, and humics ! LCOV_EXCL_LINE
47 : + 3 & ! DMSPp, DMSPd, DMS ! LCOV_EXCL_LINE
48 : + max_fe*2 & ! dissolved Fe and particulate Fe ! LCOV_EXCL_LINE
49 : + max_aero ! aerosols
50 :
51 : integer (kind=int_kind), public :: &
52 : ntrcr = 0, & ! number of tracers in use ! LCOV_EXCL_LINE
53 : ntrcr_o = 0, & ! number of non-bio tracers in use ! LCOV_EXCL_LINE
54 : ncat = 0, & ! number of ice categories in use ! LCOV_EXCL_LINE
55 : nilyr = 0, & ! number of ice layers per category ! LCOV_EXCL_LINE
56 : nslyr = 0, & ! number of snow layers per category ! LCOV_EXCL_LINE
57 : nblyr = 0, & ! number of bio/brine layers per category ! LCOV_EXCL_LINE
58 : nfsd = 0, & ! number of fsd layers ! LCOV_EXCL_LINE
59 : n_iso = 0, & ! number of isotopes in use ! LCOV_EXCL_LINE
60 : n_aero = 0, & ! number of aerosols in use ! LCOV_EXCL_LINE
61 : n_zaero = 0, & ! number of z aerosols in use ! LCOV_EXCL_LINE
62 : n_algae = 0, & ! number of algae in use ! LCOV_EXCL_LINE
63 : n_doc = 0, & ! number of DOC pools in use ! LCOV_EXCL_LINE
64 : n_dic = 0, & ! number of DIC pools in use ! LCOV_EXCL_LINE
65 : n_don = 0, & ! number of DON pools in use ! LCOV_EXCL_LINE
66 : n_fed = 0, & ! number of Fe pools in use dissolved Fe ! LCOV_EXCL_LINE
67 : n_fep = 0 ! number of Fe pools in use particulate Fe
68 :
69 : integer (kind=int_kind), public :: &
70 : nt_Tsfc = 0, & ! ice/snow temperature ! LCOV_EXCL_LINE
71 : nt_qice = 0, & ! volume-weighted ice enthalpy (in layers) ! LCOV_EXCL_LINE
72 : nt_qsno = 0, & ! volume-weighted snow enthalpy (in layers) ! LCOV_EXCL_LINE
73 : nt_sice = 0, & ! volume-weighted ice bulk salinity (CICE grid layers) ! LCOV_EXCL_LINE
74 : nt_fbri = 0, & ! volume fraction of ice with dynamic salt (hinS/vicen*aicen) ! LCOV_EXCL_LINE
75 : nt_iage = 0, & ! volume-weighted ice age ! LCOV_EXCL_LINE
76 : nt_FY = 0, & ! area-weighted first-year ice area ! LCOV_EXCL_LINE
77 : nt_alvl = 0, & ! level ice area fraction ! LCOV_EXCL_LINE
78 : nt_vlvl = 0, & ! level ice volume fraction ! LCOV_EXCL_LINE
79 : nt_apnd = 0, & ! melt pond area fraction ! LCOV_EXCL_LINE
80 : nt_hpnd = 0, & ! melt pond depth ! LCOV_EXCL_LINE
81 : nt_ipnd = 0, & ! melt pond refrozen lid thickness ! LCOV_EXCL_LINE
82 : nt_fsd = 0, & ! floe size distribution ! LCOV_EXCL_LINE
83 : nt_smice = 0, & ! mass of ice in snow ! LCOV_EXCL_LINE
84 : nt_smliq = 0, & ! mass of liquid water in snow ! LCOV_EXCL_LINE
85 : nt_rhos = 0, & ! snow density ! LCOV_EXCL_LINE
86 : nt_rsnw = 0, & ! snow grain radius ! LCOV_EXCL_LINE
87 : nt_isosno = 0, & ! starting index for isotopes in snow ! LCOV_EXCL_LINE
88 : nt_isoice = 0, & ! starting index for isotopes in ice ! LCOV_EXCL_LINE
89 : nt_aero = 0, & ! starting index for aerosols in ice ! LCOV_EXCL_LINE
90 : nt_bgc_Nit = 0, & ! nutrients ! LCOV_EXCL_LINE
91 : nt_bgc_Am = 0, & ! ! LCOV_EXCL_LINE
92 : nt_bgc_Sil = 0, & ! ! LCOV_EXCL_LINE
93 : nt_bgc_DMSPp = 0, & ! trace gases (skeletal layer) ! LCOV_EXCL_LINE
94 : nt_bgc_DMSPd = 0, & ! ! LCOV_EXCL_LINE
95 : nt_bgc_DMS = 0, & ! ! LCOV_EXCL_LINE
96 : nt_bgc_PON = 0, & ! zooplankton and detritus ! LCOV_EXCL_LINE
97 : nt_bgc_hum = 0, & ! humic material ! LCOV_EXCL_LINE
98 : nt_zbgc_frac = 0, & ! fraction of tracer in the mobile phase ! LCOV_EXCL_LINE
99 : nt_bgc_S = 0 ! Bulk salinity in fraction ice with dynamic salinity (Bio grid) (deprecated)
100 :
101 : logical (kind=log_kind), public :: &
102 : tr_iage = .false., & ! if .true., use age tracer ! LCOV_EXCL_LINE
103 : tr_FY = .false., & ! if .true., use first-year area tracer ! LCOV_EXCL_LINE
104 : tr_lvl = .false., & ! if .true., use level ice tracer ! LCOV_EXCL_LINE
105 : tr_pond = .false., & ! if .true., use melt pond tracer ! LCOV_EXCL_LINE
106 : tr_pond_lvl = .false., & ! if .true., use level-ice pond tracer ! LCOV_EXCL_LINE
107 : tr_pond_topo = .false., & ! if .true., use explicit topography-based ponds ! LCOV_EXCL_LINE
108 : tr_snow = .false., & ! if .true., use snow redistribution or metamorphosis tracers ! LCOV_EXCL_LINE
109 : tr_iso = .false., & ! if .true., use isotope tracers ! LCOV_EXCL_LINE
110 : tr_aero = .false., & ! if .true., use aerosol tracers ! LCOV_EXCL_LINE
111 : tr_brine = .false., & ! if .true., brine height differs from ice thickness ! LCOV_EXCL_LINE
112 : tr_fsd = .false. ! if .true., use floe size distribution
113 :
114 : !-----------------------------------------------------------------
115 : ! biogeochemistry
116 : !-----------------------------------------------------------------
117 :
118 : logical (kind=log_kind), public :: &
119 : tr_zaero = .false., & ! if .true., black carbon as tracers (n_zaero) ! LCOV_EXCL_LINE
120 : tr_bgc_Nit = .false., & ! if .true. Nitrate tracer in ice ! LCOV_EXCL_LINE
121 : tr_bgc_N = .false., & ! if .true., algal nitrogen tracers (n_algae) ! LCOV_EXCL_LINE
122 : tr_bgc_DON = .false., & ! if .true., DON pools are tracers (n_don) ! LCOV_EXCL_LINE
123 : tr_bgc_C = .false., & ! if .true., algal carbon tracers + DOC and DIC ! LCOV_EXCL_LINE
124 : tr_bgc_chl = .false., & ! if .true., algal chlorophyll tracers ! LCOV_EXCL_LINE
125 : tr_bgc_Am = .false., & ! if .true., ammonia/um as nutrient tracer ! LCOV_EXCL_LINE
126 : tr_bgc_Sil = .false., & ! if .true., silicon as nutrient tracer ! LCOV_EXCL_LINE
127 : tr_bgc_DMS = .false., & ! if .true., DMS as tracer ! LCOV_EXCL_LINE
128 : tr_bgc_Fe = .false., & ! if .true., Fe as tracer ! LCOV_EXCL_LINE
129 : tr_bgc_PON = .false., & ! if .true., PON as tracer ! LCOV_EXCL_LINE
130 : tr_bgc_hum = .false. ! if .true., humic material as tracer
131 :
132 : integer (kind=int_kind), public :: &
133 : nbtrcr = 0, & ! number of bgc tracers in use ! LCOV_EXCL_LINE
134 : nbtrcr_sw = 0, & ! number of bgc tracers which impact shortwave ! LCOV_EXCL_LINE
135 : nlt_chl_sw = 0 ! points to total chla in trcrn_sw
136 :
137 : integer (kind=int_kind), dimension(max_aero), public :: &
138 : nlt_zaero_sw = 0 ! points to aerosol in trcrn_sw
139 :
140 : integer (kind=int_kind), dimension(max_algae), public :: &
141 : nlt_bgc_N = 0, & ! algae ! LCOV_EXCL_LINE
142 : nlt_bgc_C = 0, & ! ! LCOV_EXCL_LINE
143 : nlt_bgc_chl = 0 !
144 :
145 : integer (kind=int_kind), dimension(max_doc), public :: &
146 : nlt_bgc_DOC = 0 ! disolved organic carbon
147 :
148 : integer (kind=int_kind), dimension(max_don), public :: &
149 : nlt_bgc_DON = 0 !
150 :
151 : integer (kind=int_kind), dimension(max_dic), public :: &
152 : nlt_bgc_DIC = 0 ! disolved inorganic carbon
153 :
154 : integer (kind=int_kind), dimension(max_fe), public :: &
155 : nlt_bgc_Fed = 0, & ! ! LCOV_EXCL_LINE
156 : nlt_bgc_Fep = 0 !
157 :
158 : integer (kind=int_kind), dimension(max_aero), public :: &
159 : nlt_zaero = 0 ! non-reacting layer aerosols
160 :
161 : integer (kind=int_kind), public :: &
162 : nlt_bgc_Nit = 0, & ! nutrients ! LCOV_EXCL_LINE
163 : nlt_bgc_Am = 0, & ! ! LCOV_EXCL_LINE
164 : nlt_bgc_Sil = 0, & ! ! LCOV_EXCL_LINE
165 : nlt_bgc_DMSPp= 0, & ! trace gases (skeletal layer) ! LCOV_EXCL_LINE
166 : nlt_bgc_DMSPd= 0, & ! ! LCOV_EXCL_LINE
167 : nlt_bgc_DMS = 0, & ! ! LCOV_EXCL_LINE
168 : nlt_bgc_PON = 0, & ! zooplankton and detritus ! LCOV_EXCL_LINE
169 : nlt_bgc_hum = 0 ! humic material
170 :
171 : integer (kind=int_kind), dimension(max_algae), public :: &
172 : nt_bgc_N = 0, & ! diatoms, phaeocystis, pico/small ! LCOV_EXCL_LINE
173 : nt_bgc_C = 0, & ! diatoms, phaeocystis, pico/small ! LCOV_EXCL_LINE
174 : nt_bgc_chl = 0 ! diatoms, phaeocystis, pico/small
175 :
176 : integer (kind=int_kind), dimension(max_doc), public :: &
177 : nt_bgc_DOC = 0 ! dissolved organic carbon
178 :
179 : integer (kind=int_kind), dimension(max_don), public :: &
180 : nt_bgc_DON = 0 ! dissolved organic nitrogen
181 :
182 : integer (kind=int_kind), dimension(max_dic), public :: &
183 : nt_bgc_DIC = 0 ! dissolved inorganic carbon
184 :
185 : integer (kind=int_kind), dimension(max_fe), public :: &
186 : nt_bgc_Fed = 0, & ! dissolved iron ! LCOV_EXCL_LINE
187 : nt_bgc_Fep = 0 ! particulate iron
188 :
189 : integer (kind=int_kind), dimension(max_aero), public :: &
190 : nt_zaero = 0 ! black carbon and other aerosols
191 :
192 : integer (kind=int_kind), dimension(max_nbtrcr), public :: &
193 : bio_index_o = 0 ! relates nlt_bgc_NO to ocean concentration index
194 : ! see ocean_bio_all
195 :
196 : integer (kind=int_kind), dimension(max_nbtrcr), public :: &
197 : bio_index = 0 ! relates bio indices, ie. nlt_bgc_N to nt_bgc_N
198 :
199 : !=======================================================================
200 :
201 : contains
202 :
203 : !=======================================================================
204 : !autodocument_start icepack_init_tracer_flags
205 : ! set tracer active flags
206 :
207 8444 : subroutine icepack_init_tracer_flags(&
208 : tr_iage_in, tr_FY_in, tr_lvl_in, tr_snow_in, & ! LCOV_EXCL_LINE
209 : tr_pond_in, tr_pond_lvl_in, tr_pond_topo_in, & ! LCOV_EXCL_LINE
210 : tr_fsd_in, tr_aero_in, tr_iso_in, tr_brine_in, tr_zaero_in, & ! LCOV_EXCL_LINE
211 : tr_bgc_Nit_in, tr_bgc_N_in, tr_bgc_DON_in, tr_bgc_C_in, tr_bgc_chl_in, & ! LCOV_EXCL_LINE
212 : tr_bgc_Am_in, tr_bgc_Sil_in, tr_bgc_DMS_in, tr_bgc_Fe_in, tr_bgc_hum_in, & ! LCOV_EXCL_LINE
213 : tr_bgc_PON_in)
214 :
215 : logical, intent(in), optional :: &
216 : tr_iage_in , & ! if .true., use age tracer ! LCOV_EXCL_LINE
217 : tr_FY_in , & ! if .true., use first-year area tracer ! LCOV_EXCL_LINE
218 : tr_lvl_in , & ! if .true., use level ice tracer ! LCOV_EXCL_LINE
219 : tr_pond_in , & ! if .true., use melt pond tracer ! LCOV_EXCL_LINE
220 : tr_pond_lvl_in , & ! if .true., use level-ice pond tracer ! LCOV_EXCL_LINE
221 : tr_pond_topo_in , & ! if .true., use explicit topography-based ponds ! LCOV_EXCL_LINE
222 : tr_snow_in , & ! if .true., use snow redistribution or metamorphosis tracers ! LCOV_EXCL_LINE
223 : tr_fsd_in , & ! if .true., use floe size distribution tracers ! LCOV_EXCL_LINE
224 : tr_iso_in , & ! if .true., use isotope tracers ! LCOV_EXCL_LINE
225 : tr_aero_in , & ! if .true., use aerosol tracers ! LCOV_EXCL_LINE
226 : tr_brine_in , & ! if .true., brine height differs from ice thickness ! LCOV_EXCL_LINE
227 : tr_zaero_in , & ! if .true., black carbon is tracers (n_zaero) ! LCOV_EXCL_LINE
228 : tr_bgc_Nit_in , & ! if .true., Nitrate tracer in ice ! LCOV_EXCL_LINE
229 : tr_bgc_N_in , & ! if .true., algal nitrogen tracers (n_algae) ! LCOV_EXCL_LINE
230 : tr_bgc_DON_in , & ! if .true., DON pools are tracers (n_don) ! LCOV_EXCL_LINE
231 : tr_bgc_C_in , & ! if .true., algal carbon tracers + DOC and DIC ! LCOV_EXCL_LINE
232 : tr_bgc_chl_in , & ! if .true., algal chlorophyll tracers ! LCOV_EXCL_LINE
233 : tr_bgc_Am_in , & ! if .true., ammonia/um as nutrient tracer ! LCOV_EXCL_LINE
234 : tr_bgc_Sil_in , & ! if .true., silicon as nutrient tracer ! LCOV_EXCL_LINE
235 : tr_bgc_DMS_in , & ! if .true., DMS as product tracer ! LCOV_EXCL_LINE
236 : tr_bgc_Fe_in , & ! if .true., Fe as product tracer ! LCOV_EXCL_LINE
237 : tr_bgc_hum_in , & ! if .true., hum as product tracer ! LCOV_EXCL_LINE
238 : tr_bgc_PON_in ! if .true., PON as product tracer
239 :
240 : !autodocument_end
241 :
242 : character(len=*),parameter :: subname='(icepack_init_tracer_flags)'
243 :
244 8444 : if (present(tr_iage_in)) tr_iage = tr_iage_in
245 8444 : if (present(tr_FY_in) ) tr_FY = tr_FY_in
246 8444 : if (present(tr_lvl_in) ) tr_lvl = tr_lvl_in
247 8444 : if (present(tr_pond_in)) tr_pond = tr_pond_in
248 8444 : if (present(tr_pond_lvl_in) ) tr_pond_lvl = tr_pond_lvl_in
249 8444 : if (present(tr_pond_topo_in)) tr_pond_topo = tr_pond_topo_in
250 8444 : if (present(tr_snow_in) ) tr_snow = tr_snow_in
251 8444 : if (present(tr_fsd_in) ) tr_fsd = tr_fsd_in
252 8444 : if (present(tr_iso_in) ) tr_iso = tr_iso_in
253 8444 : if (present(tr_aero_in) ) tr_aero = tr_aero_in
254 8444 : if (present(tr_brine_in) ) tr_brine = tr_brine_in
255 8444 : if (present(tr_zaero_in) ) tr_zaero = tr_zaero_in
256 8444 : if (present(tr_bgc_Nit_in)) tr_bgc_Nit = tr_bgc_Nit_in
257 8444 : if (present(tr_bgc_N_in) ) tr_bgc_N = tr_bgc_N_in
258 8444 : if (present(tr_bgc_DON_in)) tr_bgc_DON = tr_bgc_DON_in
259 8444 : if (present(tr_bgc_C_in) ) tr_bgc_C = tr_bgc_C_in
260 8444 : if (present(tr_bgc_chl_in)) tr_bgc_chl = tr_bgc_chl_in
261 8444 : if (present(tr_bgc_Am_in) ) tr_bgc_Am = tr_bgc_Am_in
262 8444 : if (present(tr_bgc_Sil_in)) tr_bgc_Sil = tr_bgc_Sil_in
263 8444 : if (present(tr_bgc_DMS_in)) tr_bgc_DMS = tr_bgc_DMS_in
264 8444 : if (present(tr_bgc_Fe_in )) tr_bgc_Fe = tr_bgc_Fe_in
265 8444 : if (present(tr_bgc_hum_in)) tr_bgc_hum = tr_bgc_hum_in
266 8444 : if (present(tr_bgc_PON_in)) tr_bgc_PON = tr_bgc_PON_in
267 :
268 8444 : end subroutine icepack_init_tracer_flags
269 :
270 : !=======================================================================
271 : !autodocument_start icepack_query_tracer_flags
272 : ! query tracer active flags
273 :
274 102929009 : subroutine icepack_query_tracer_flags(&
275 : tr_iage_out, tr_FY_out, tr_lvl_out, tr_snow_out, & ! LCOV_EXCL_LINE
276 : tr_pond_out, tr_pond_lvl_out, tr_pond_topo_out, & ! LCOV_EXCL_LINE
277 : tr_fsd_out, tr_aero_out, tr_iso_out, tr_brine_out, tr_zaero_out, & ! LCOV_EXCL_LINE
278 : tr_bgc_Nit_out, tr_bgc_N_out, tr_bgc_DON_out, tr_bgc_C_out, tr_bgc_chl_out, & ! LCOV_EXCL_LINE
279 : tr_bgc_Am_out, tr_bgc_Sil_out, tr_bgc_DMS_out, tr_bgc_Fe_out, tr_bgc_hum_out, & ! LCOV_EXCL_LINE
280 : tr_bgc_PON_out)
281 :
282 : logical, intent(out), optional :: &
283 : tr_iage_out , & ! if .true., use age tracer ! LCOV_EXCL_LINE
284 : tr_FY_out , & ! if .true., use first-year area tracer ! LCOV_EXCL_LINE
285 : tr_lvl_out , & ! if .true., use level ice tracer ! LCOV_EXCL_LINE
286 : tr_pond_out , & ! if .true., use melt pond tracer ! LCOV_EXCL_LINE
287 : tr_pond_lvl_out , & ! if .true., use level-ice pond tracer ! LCOV_EXCL_LINE
288 : tr_pond_topo_out , & ! if .true., use explicit topography-based ponds ! LCOV_EXCL_LINE
289 : tr_snow_out , & ! if .true., use snow redistribution or metamorphosis tracers ! LCOV_EXCL_LINE
290 : tr_fsd_out , & ! if .true., use floe size distribution ! LCOV_EXCL_LINE
291 : tr_iso_out , & ! if .true., use isotope tracers ! LCOV_EXCL_LINE
292 : tr_aero_out , & ! if .true., use aerosol tracers ! LCOV_EXCL_LINE
293 : tr_brine_out , & ! if .true., brine height differs from ice thickness ! LCOV_EXCL_LINE
294 : tr_zaero_out , & ! if .true., black carbon is tracers (n_zaero) ! LCOV_EXCL_LINE
295 : tr_bgc_Nit_out , & ! if .true., Nitrate tracer in ice ! LCOV_EXCL_LINE
296 : tr_bgc_N_out , & ! if .true., algal nitrogen tracers (n_algae) ! LCOV_EXCL_LINE
297 : tr_bgc_DON_out , & ! if .true., DON pools are tracers (n_don) ! LCOV_EXCL_LINE
298 : tr_bgc_C_out , & ! if .true., algal carbon tracers + DOC and DIC ! LCOV_EXCL_LINE
299 : tr_bgc_chl_out , & ! if .true., algal chlorophyll tracers ! LCOV_EXCL_LINE
300 : tr_bgc_Am_out , & ! if .true., ammonia/um as nutrient tracer ! LCOV_EXCL_LINE
301 : tr_bgc_Sil_out , & ! if .true., silicon as nutrient tracer ! LCOV_EXCL_LINE
302 : tr_bgc_DMS_out , & ! if .true., DMS as product tracer ! LCOV_EXCL_LINE
303 : tr_bgc_Fe_out , & ! if .true., Fe as product tracer ! LCOV_EXCL_LINE
304 : tr_bgc_hum_out , & ! if .true., hum as product tracer ! LCOV_EXCL_LINE
305 : tr_bgc_PON_out ! if .true., PON as product tracer
306 :
307 : !autodocument_end
308 :
309 : character(len=*),parameter :: subname='(icepack_query_tracer_flags)'
310 :
311 102929009 : if (present(tr_iage_out)) tr_iage_out = tr_iage
312 102929009 : if (present(tr_FY_out) ) tr_FY_out = tr_FY
313 102929009 : if (present(tr_lvl_out) ) tr_lvl_out = tr_lvl
314 102929009 : if (present(tr_pond_out)) tr_pond_out = tr_pond
315 102929009 : if (present(tr_pond_lvl_out) ) tr_pond_lvl_out = tr_pond_lvl
316 102929009 : if (present(tr_pond_topo_out)) tr_pond_topo_out = tr_pond_topo
317 102929009 : if (present(tr_snow_out) ) tr_snow_out = tr_snow
318 102929009 : if (present(tr_fsd_out) ) tr_fsd_out = tr_fsd
319 102929009 : if (present(tr_iso_out) ) tr_iso_out = tr_iso
320 102929009 : if (present(tr_aero_out) ) tr_aero_out = tr_aero
321 102929009 : if (present(tr_brine_out) ) tr_brine_out = tr_brine
322 102929009 : if (present(tr_zaero_out) ) tr_zaero_out = tr_zaero
323 102929009 : if (present(tr_bgc_Nit_out)) tr_bgc_Nit_out = tr_bgc_Nit
324 102929009 : if (present(tr_bgc_N_out) ) tr_bgc_N_out = tr_bgc_N
325 102929009 : if (present(tr_bgc_DON_out)) tr_bgc_DON_out = tr_bgc_DON
326 102929009 : if (present(tr_bgc_C_out) ) tr_bgc_C_out = tr_bgc_C
327 102929009 : if (present(tr_bgc_chl_out)) tr_bgc_chl_out = tr_bgc_chl
328 102929009 : if (present(tr_bgc_Am_out) ) tr_bgc_Am_out = tr_bgc_Am
329 102929009 : if (present(tr_bgc_Sil_out)) tr_bgc_Sil_out = tr_bgc_Sil
330 102929009 : if (present(tr_bgc_DMS_out)) tr_bgc_DMS_out = tr_bgc_DMS
331 102929009 : if (present(tr_bgc_Fe_out )) tr_bgc_Fe_out = tr_bgc_Fe
332 102929009 : if (present(tr_bgc_hum_out)) tr_bgc_hum_out = tr_bgc_hum
333 102929009 : if (present(tr_bgc_PON_out)) tr_bgc_PON_out = tr_bgc_PON
334 :
335 102929009 : end subroutine icepack_query_tracer_flags
336 :
337 : !=======================================================================
338 : !autodocument_start icepack_write_tracer_flags
339 : ! write tracer active flags
340 :
341 375 : subroutine icepack_write_tracer_flags(iounit)
342 :
343 : integer, intent(in) :: iounit
344 :
345 : !autodocument_end
346 :
347 : character(len=*),parameter :: subname='(icepack_write_tracer_flags)'
348 :
349 375 : write(iounit,*) subname//":"
350 375 : write(iounit,*) " tr_iage = ",tr_iage
351 375 : write(iounit,*) " tr_FY = ",tr_FY
352 375 : write(iounit,*) " tr_lvl = ",tr_lvl
353 375 : write(iounit,*) " tr_pond = ",tr_pond
354 375 : write(iounit,*) " tr_pond_lvl = ",tr_pond_lvl
355 375 : write(iounit,*) " tr_pond_topo = ",tr_pond_topo
356 375 : write(iounit,*) " tr_snow = ",tr_snow
357 375 : write(iounit,*) " tr_fsd = ",tr_fsd
358 375 : write(iounit,*) " tr_iso = ",tr_iso
359 375 : write(iounit,*) " tr_aero = ",tr_aero
360 375 : write(iounit,*) " tr_brine = ",tr_brine
361 375 : write(iounit,*) " tr_zaero = ",tr_zaero
362 375 : write(iounit,*) " tr_bgc_Nit = ",tr_bgc_Nit
363 375 : write(iounit,*) " tr_bgc_N = ",tr_bgc_N
364 375 : write(iounit,*) " tr_bgc_DON = ",tr_bgc_DON
365 375 : write(iounit,*) " tr_bgc_C = ",tr_bgc_C
366 375 : write(iounit,*) " tr_bgc_chl = ",tr_bgc_chl
367 375 : write(iounit,*) " tr_bgc_Am = ",tr_bgc_Am
368 375 : write(iounit,*) " tr_bgc_Sil = ",tr_bgc_Sil
369 375 : write(iounit,*) " tr_bgc_DMS = ",tr_bgc_DMS
370 375 : write(iounit,*) " tr_bgc_Fe = ",tr_bgc_Fe
371 375 : write(iounit,*) " tr_bgc_hum = ",tr_bgc_hum
372 375 : write(iounit,*) " tr_bgc_PON = ",tr_bgc_PON
373 :
374 375 : end subroutine icepack_write_tracer_flags
375 :
376 : !=======================================================================
377 : !autodocument_start icepack_init_tracer_indices
378 : ! set the number of column tracer indices
379 :
380 8444 : subroutine icepack_init_tracer_indices(&
381 : nt_Tsfc_in, nt_qice_in, nt_qsno_in, nt_sice_in, & ! LCOV_EXCL_LINE
382 : nt_fbri_in, nt_iage_in, nt_FY_in, & ! LCOV_EXCL_LINE
383 : nt_alvl_in, nt_vlvl_in, nt_apnd_in, nt_hpnd_in, nt_ipnd_in, & ! LCOV_EXCL_LINE
384 : nt_smice_in, nt_smliq_in, nt_rhos_in, nt_rsnw_in, & ! LCOV_EXCL_LINE
385 : nt_fsd_in, nt_isosno_in, nt_isoice_in, & ! LCOV_EXCL_LINE
386 16888 : nt_aero_in, nt_zaero_in, nt_bgc_C_in, & ! LCOV_EXCL_LINE
387 33776 : nt_bgc_N_in, nt_bgc_chl_in, nt_bgc_DOC_in, nt_bgc_DON_in, & ! LCOV_EXCL_LINE
388 25332 : nt_bgc_DIC_in, nt_bgc_Fed_in, nt_bgc_Fep_in, nt_bgc_Nit_in, nt_bgc_Am_in, & ! LCOV_EXCL_LINE
389 : nt_bgc_Sil_in, nt_bgc_DMSPp_in, nt_bgc_DMSPd_in, nt_bgc_DMS_in, nt_bgc_hum_in, & ! LCOV_EXCL_LINE
390 33776 : nt_bgc_PON_in, nlt_zaero_in, nlt_bgc_C_in, nlt_bgc_N_in, nlt_bgc_chl_in, & ! LCOV_EXCL_LINE
391 33776 : nlt_bgc_DOC_in, nlt_bgc_DON_in, nlt_bgc_DIC_in, nlt_bgc_Fed_in, & ! LCOV_EXCL_LINE
392 8444 : nlt_bgc_Fep_in, nlt_bgc_Nit_in, nlt_bgc_Am_in, nlt_bgc_Sil_in, & ! LCOV_EXCL_LINE
393 : nlt_bgc_DMSPp_in, nlt_bgc_DMSPd_in, nlt_bgc_DMS_in, nlt_bgc_hum_in, & ! LCOV_EXCL_LINE
394 : nlt_bgc_PON_in, nt_zbgc_frac_in, nt_bgc_S_in, nlt_chl_sw_in, & ! LCOV_EXCL_LINE
395 8444 : nlt_zaero_sw_in, & ! LCOV_EXCL_LINE
396 8444 : bio_index_o_in, bio_index_in)
397 :
398 : integer, intent(in), optional :: &
399 : nt_Tsfc_in, & ! ice/snow temperature ! LCOV_EXCL_LINE
400 : nt_qice_in, & ! volume-weighted ice enthalpy (in layers) ! LCOV_EXCL_LINE
401 : nt_qsno_in, & ! volume-weighted snow enthalpy (in layers) ! LCOV_EXCL_LINE
402 : nt_sice_in, & ! volume-weighted ice bulk salinity (CICE grid layers) ! LCOV_EXCL_LINE
403 : nt_fbri_in, & ! volume fraction of ice with dynamic salt (hinS/vicen*aicen) ! LCOV_EXCL_LINE
404 : nt_iage_in, & ! volume-weighted ice age ! LCOV_EXCL_LINE
405 : nt_FY_in, & ! area-weighted first-year ice area ! LCOV_EXCL_LINE
406 : nt_alvl_in, & ! level ice area fraction ! LCOV_EXCL_LINE
407 : nt_vlvl_in, & ! level ice volume fraction ! LCOV_EXCL_LINE
408 : nt_apnd_in, & ! melt pond area fraction ! LCOV_EXCL_LINE
409 : nt_hpnd_in, & ! melt pond depth ! LCOV_EXCL_LINE
410 : nt_ipnd_in, & ! melt pond refrozen lid thickness ! LCOV_EXCL_LINE
411 : nt_smice_in,& ! mass of ice in snow ! LCOV_EXCL_LINE
412 : nt_smliq_in,& ! mass of liquid water in snow ! LCOV_EXCL_LINE
413 : nt_rhos_in, & ! snow density ! LCOV_EXCL_LINE
414 : nt_rsnw_in, & ! snow grain radius ! LCOV_EXCL_LINE
415 : nt_fsd_in, & ! floe size distribution ! LCOV_EXCL_LINE
416 : nt_isosno_in, & ! starting index for isotopes in snow ! LCOV_EXCL_LINE
417 : nt_isoice_in, & ! starting index for isotopes in ice ! LCOV_EXCL_LINE
418 : nt_aero_in, & ! starting index for aerosols in ice ! LCOV_EXCL_LINE
419 : nt_bgc_Nit_in, & ! nutrients ! LCOV_EXCL_LINE
420 : nt_bgc_Am_in, & ! ! LCOV_EXCL_LINE
421 : nt_bgc_Sil_in, & ! ! LCOV_EXCL_LINE
422 : nt_bgc_DMSPp_in,&! trace gases (skeletal layer) ! LCOV_EXCL_LINE
423 : nt_bgc_DMSPd_in,&! ! LCOV_EXCL_LINE
424 : nt_bgc_DMS_in, & ! ! LCOV_EXCL_LINE
425 : nt_bgc_hum_in, & ! ! LCOV_EXCL_LINE
426 : nt_bgc_PON_in, & ! zooplankton and detritus ! LCOV_EXCL_LINE
427 : nlt_bgc_Nit_in,& ! nutrients ! LCOV_EXCL_LINE
428 : nlt_bgc_Am_in, & ! ! LCOV_EXCL_LINE
429 : nlt_bgc_Sil_in,& ! ! LCOV_EXCL_LINE
430 : nlt_bgc_DMSPp_in,&! trace gases (skeletal layer) ! LCOV_EXCL_LINE
431 : nlt_bgc_DMSPd_in,&! ! LCOV_EXCL_LINE
432 : nlt_bgc_DMS_in,& ! ! LCOV_EXCL_LINE
433 : nlt_bgc_hum_in,& ! ! LCOV_EXCL_LINE
434 : nlt_bgc_PON_in,& ! zooplankton and detritus ! LCOV_EXCL_LINE
435 : nt_zbgc_frac_in,&! fraction of tracer in the mobile phase ! LCOV_EXCL_LINE
436 : nt_bgc_S_in, & ! (deprecated, was related to zsalinity) ! LCOV_EXCL_LINE
437 : nlt_chl_sw_in ! points to total chla in trcrn_sw
438 :
439 : integer (kind=int_kind), dimension(:), intent(in), optional :: &
440 : bio_index_o_in, & ! LCOV_EXCL_LINE
441 : bio_index_in
442 :
443 : integer (kind=int_kind), dimension(:), intent(in), optional :: &
444 : nt_bgc_N_in , & ! diatoms, phaeocystis, pico/small ! LCOV_EXCL_LINE
445 : nt_bgc_C_in , & ! diatoms, phaeocystis, pico/small ! LCOV_EXCL_LINE
446 : nt_bgc_chl_in, & ! diatoms, phaeocystis, pico/small ! LCOV_EXCL_LINE
447 : nlt_bgc_N_in , & ! diatoms, phaeocystis, pico/small ! LCOV_EXCL_LINE
448 : nlt_bgc_C_in , & ! diatoms, phaeocystis, pico/small ! LCOV_EXCL_LINE
449 : nlt_bgc_chl_in ! diatoms, phaeocystis, pico/small
450 :
451 : integer (kind=int_kind), dimension(:), intent(in), optional :: &
452 : nt_bgc_DOC_in, & ! dissolved organic carbon ! LCOV_EXCL_LINE
453 : nlt_bgc_DOC_in ! dissolved organic carbon
454 :
455 : integer (kind=int_kind), dimension(:), intent(in), optional :: &
456 : nt_bgc_DON_in, & ! dissolved organic nitrogen ! LCOV_EXCL_LINE
457 : nlt_bgc_DON_in ! dissolved organic nitrogen
458 :
459 : integer (kind=int_kind), dimension(:), intent(in), optional :: &
460 : nt_bgc_DIC_in, & ! dissolved inorganic carbon ! LCOV_EXCL_LINE
461 : nlt_bgc_DIC_in ! dissolved inorganic carbon
462 :
463 : integer (kind=int_kind), dimension(:), intent(in), optional :: &
464 : nt_bgc_Fed_in, & ! dissolved iron ! LCOV_EXCL_LINE
465 : nt_bgc_Fep_in, & ! particulate iron ! LCOV_EXCL_LINE
466 : nlt_bgc_Fed_in,& ! dissolved iron ! LCOV_EXCL_LINE
467 : nlt_bgc_Fep_in ! particulate iron
468 :
469 : integer (kind=int_kind), dimension(:), intent(in), optional :: &
470 : nt_zaero_in, & ! black carbon and other aerosols ! LCOV_EXCL_LINE
471 : nlt_zaero_in, & ! black carbon and other aerosols ! LCOV_EXCL_LINE
472 : nlt_zaero_sw_in ! black carbon and dust in trcrn_sw
473 :
474 : !autodocument_end
475 :
476 : ! local
477 : integer (kind=int_kind) :: nsiz
478 : character(len=*),parameter :: subname='(icepack_init_tracer_indices)'
479 :
480 8444 : if (present(nt_Tsfc_in)) nt_Tsfc = nt_Tsfc_in
481 8444 : if (present(nt_qice_in)) nt_qice = nt_qice_in
482 8444 : if (present(nt_qsno_in)) nt_qsno = nt_qsno_in
483 8444 : if (present(nt_sice_in)) nt_sice = nt_sice_in
484 8444 : if (present(nt_fbri_in)) nt_fbri = nt_fbri_in
485 8444 : if (present(nt_iage_in)) nt_iage = nt_iage_in
486 8444 : if (present(nt_FY_in) ) nt_FY = nt_FY_in
487 8444 : if (present(nt_alvl_in)) nt_alvl = nt_alvl_in
488 8444 : if (present(nt_vlvl_in)) nt_vlvl = nt_vlvl_in
489 8444 : if (present(nt_apnd_in)) nt_apnd = nt_apnd_in
490 8444 : if (present(nt_hpnd_in)) nt_hpnd = nt_hpnd_in
491 8444 : if (present(nt_ipnd_in)) nt_ipnd = nt_ipnd_in
492 8444 : if (present(nt_fsd_in) ) nt_fsd = nt_fsd_in
493 8444 : if (present(nt_smice_in) ) nt_smice = nt_smice_in
494 8444 : if (present(nt_smliq_in) ) nt_smliq = nt_smliq_in
495 8444 : if (present(nt_rhos_in) ) nt_rhos = nt_rhos_in
496 8444 : if (present(nt_rsnw_in) ) nt_rsnw = nt_rsnw_in
497 8444 : if (present(nt_isosno_in) ) nt_isosno = nt_isosno_in
498 8444 : if (present(nt_isoice_in) ) nt_isoice = nt_isoice_in
499 8444 : if (present(nt_aero_in) ) nt_aero = nt_aero_in
500 8444 : if (present(nt_bgc_Nit_in) ) nt_bgc_Nit = nt_bgc_Nit_in
501 8444 : if (present(nt_bgc_Am_in) ) nt_bgc_Am = nt_bgc_Am_in
502 8444 : if (present(nt_bgc_Sil_in) ) nt_bgc_Sil = nt_bgc_Sil_in
503 8444 : if (present(nt_bgc_DMSPp_in) ) nt_bgc_DMSPp = nt_bgc_DMSPp_in
504 8444 : if (present(nt_bgc_DMSPd_in) ) nt_bgc_DMSPd = nt_bgc_DMSPd_in
505 8444 : if (present(nt_bgc_DMS_in) ) nt_bgc_DMS = nt_bgc_DMS_in
506 8444 : if (present(nt_bgc_hum_in) ) nt_bgc_hum = nt_bgc_hum_in
507 8444 : if (present(nt_bgc_PON_in) ) nt_bgc_PON = nt_bgc_PON_in
508 8444 : if (present(nlt_bgc_Nit_in) ) nlt_bgc_Nit = nlt_bgc_Nit_in
509 8444 : if (present(nlt_bgc_Am_in) ) nlt_bgc_Am = nlt_bgc_Am_in
510 8444 : if (present(nlt_bgc_Sil_in) ) nlt_bgc_Sil = nlt_bgc_Sil_in
511 8444 : if (present(nlt_bgc_DMSPp_in)) nlt_bgc_DMSPp = nlt_bgc_DMSPp_in
512 8444 : if (present(nlt_bgc_DMSPd_in)) nlt_bgc_DMSPd = nlt_bgc_DMSPd_in
513 8444 : if (present(nlt_bgc_DMS_in) ) nlt_bgc_DMS = nlt_bgc_DMS_in
514 8444 : if (present(nlt_bgc_hum_in) ) nlt_bgc_hum = nlt_bgc_hum_in
515 8444 : if (present(nlt_bgc_PON_in) ) nlt_bgc_PON = nlt_bgc_PON_in
516 8444 : if (present(nlt_chl_sw_in) ) nlt_chl_sw = nlt_chl_sw_in
517 8444 : if (present(nt_zbgc_frac_in) ) nt_zbgc_frac = nt_zbgc_frac_in
518 8444 : if (present(nt_bgc_S_in) ) nt_bgc_S = nt_bgc_S_in
519 :
520 8444 : if (present(bio_index_in)) then
521 4222 : nsiz = size(bio_index_in)
522 4222 : if (size(bio_index) < nsiz) then
523 0 : call icepack_warnings_add(subname//'error in bio_index size')
524 0 : call icepack_warnings_setabort(.true.,__FILE__,__LINE__)
525 : else
526 126660 : bio_index(1:nsiz) = bio_index_in(1:nsiz)
527 : endif
528 : endif
529 :
530 8444 : if (present(bio_index_o_in)) then
531 4222 : nsiz = size(bio_index_o_in)
532 4222 : if (size(bio_index_o) < nsiz) then
533 0 : call icepack_warnings_add(subname//'error in bio_index_o size')
534 0 : call icepack_warnings_setabort(.true.,__FILE__,__LINE__)
535 : else
536 126660 : bio_index_o(1:nsiz) = bio_index_o_in(1:nsiz)
537 : endif
538 : endif
539 :
540 8444 : if (present(nt_bgc_N_in)) then
541 4222 : nsiz = size(nt_bgc_N_in)
542 4222 : if (size(nt_bgc_N) < nsiz) then
543 0 : call icepack_warnings_add(subname//'error in nt_bgc_N size')
544 0 : call icepack_warnings_setabort(.true.,__FILE__,__LINE__)
545 : else
546 16888 : nt_bgc_N(1:nsiz) = nt_bgc_N_in(1:nsiz)
547 : endif
548 : endif
549 :
550 8444 : if (present(nlt_bgc_N_in)) then
551 4222 : nsiz = size(nlt_bgc_N_in)
552 4222 : if (size(nlt_bgc_N) < nsiz) then
553 0 : call icepack_warnings_add(subname//'error in nlt_bgc_N size')
554 0 : call icepack_warnings_setabort(.true.,__FILE__,__LINE__)
555 : else
556 16888 : nlt_bgc_N(1:nsiz) = nlt_bgc_N_in(1:nsiz)
557 : endif
558 : endif
559 :
560 8444 : if (present(nt_bgc_chl_in)) then
561 4222 : nsiz = size(nt_bgc_chl_in)
562 4222 : if (size(nt_bgc_chl) < nsiz) then
563 0 : call icepack_warnings_add(subname//'error in nt_bgc_chl size')
564 0 : call icepack_warnings_setabort(.true.,__FILE__,__LINE__)
565 : else
566 16888 : nt_bgc_chl(1:nsiz) = nt_bgc_chl_in(1:nsiz)
567 : endif
568 : endif
569 :
570 8444 : if (present(nlt_bgc_chl_in)) then
571 4222 : nsiz = size(nlt_bgc_chl_in)
572 4222 : if (size(nlt_bgc_chl) < nsiz) then
573 0 : call icepack_warnings_add(subname//'error in nlt_bgc_chl size')
574 0 : call icepack_warnings_setabort(.true.,__FILE__,__LINE__)
575 : else
576 16888 : nlt_bgc_chl(1:nsiz) = nlt_bgc_chl_in(1:nsiz)
577 : endif
578 : endif
579 :
580 : ! algal C is not yet distinct from algal N
581 8444 : if (present(nt_bgc_C_in) .or. present(nlt_bgc_C_in)) then
582 0 : call icepack_warnings_add(subname//'error bgc_C not supported')
583 0 : call icepack_warnings_setabort(.true.,__FILE__,__LINE__)
584 : endif
585 :
586 : ! if (present(nt_bgc_C_in)) then
587 : ! nsiz = size(nt_bgc_C_in)
588 : ! if (size(nt_bgc_C) < nsiz) then
589 : ! call icepack_warnings_add(subname//'error in nt_bgc_C size')
590 : ! call icepack_warnings_setabort(.true.,__FILE__,__LINE__)
591 : ! else
592 : ! nt_bgc_C(1:nsiz) = nt_bgc_C_in(1:nsiz)
593 : ! endif
594 : ! endif
595 :
596 : ! if (present(nlt_bgc_C_in)) then
597 : ! nsiz = size(nlt_bgc_C_in)
598 : ! if (size(nlt_bgc_C) < nsiz) then
599 : ! call icepack_warnings_add(subname//'error in nlt_bgc_C size')
600 : ! call icepack_warnings_setabort(.true.,__FILE__,__LINE__)
601 : ! else
602 : ! nlt_bgc_C(1:nsiz) = nlt_bgc_C_in(1:nsiz)
603 : ! endif
604 : ! endif
605 :
606 8444 : if (present(nt_bgc_DOC_in)) then
607 4222 : nsiz = size(nt_bgc_DOC_in)
608 4222 : if (size(nt_bgc_DOC) < nsiz) then
609 0 : call icepack_warnings_add(subname//'error in nt_bgc_DOC size')
610 0 : call icepack_warnings_setabort(.true.,__FILE__,__LINE__)
611 : else
612 16888 : nt_bgc_DOC(1:nsiz) = nt_bgc_DOC_in(1:nsiz)
613 : endif
614 : endif
615 :
616 8444 : if (present(nlt_bgc_DOC_in)) then
617 4222 : nsiz = size(nlt_bgc_DOC_in)
618 4222 : if (size(nlt_bgc_DOC) < nsiz) then
619 0 : call icepack_warnings_add(subname//'error in nlt_bgc_DOC size')
620 0 : call icepack_warnings_setabort(.true.,__FILE__,__LINE__)
621 : else
622 16888 : nlt_bgc_DOC(1:nsiz) = nlt_bgc_DOC_in(1:nsiz)
623 : endif
624 : endif
625 :
626 8444 : if (present(nt_bgc_DON_in)) then
627 4222 : nsiz = size(nt_bgc_DON_in)
628 4222 : if (size(nt_bgc_DON) < nsiz) then
629 0 : call icepack_warnings_add(subname//'error in nt_bgc_DON size')
630 0 : call icepack_warnings_setabort(.true.,__FILE__,__LINE__)
631 : else
632 8444 : nt_bgc_DON(1:nsiz) = nt_bgc_DON_in(1:nsiz)
633 : endif
634 : endif
635 :
636 8444 : if (present(nlt_bgc_DON_in)) then
637 4222 : nsiz = size(nlt_bgc_DON_in)
638 4222 : if (size(nlt_bgc_DON) < nsiz) then
639 0 : call icepack_warnings_add(subname//'error in nlt_bgc_DON size')
640 0 : call icepack_warnings_setabort(.true.,__FILE__,__LINE__)
641 : else
642 8444 : nlt_bgc_DON(1:nsiz) = nlt_bgc_DON_in(1:nsiz)
643 : endif
644 : endif
645 :
646 8444 : if (present(nt_bgc_DIC_in)) then
647 4222 : nsiz = size(nt_bgc_DIC_in)
648 4222 : if (size(nt_bgc_DIC) < nsiz) then
649 0 : call icepack_warnings_add(subname//'error in nt_bgc_DIC size')
650 0 : call icepack_warnings_setabort(.true.,__FILE__,__LINE__)
651 : else
652 8444 : nt_bgc_DIC(1:nsiz) = nt_bgc_DIC_in(1:nsiz)
653 : endif
654 : endif
655 :
656 8444 : if (present(nlt_bgc_DIC_in)) then
657 4222 : nsiz = size(nlt_bgc_DIC_in)
658 4222 : if (size(nlt_bgc_DIC) < nsiz) then
659 0 : call icepack_warnings_add(subname//'error in nlt_bgc_DIC size')
660 0 : call icepack_warnings_setabort(.true.,__FILE__,__LINE__)
661 : else
662 8444 : nlt_bgc_DIC(1:nsiz) = nlt_bgc_DIC_in(1:nsiz)
663 : endif
664 : endif
665 :
666 8444 : if (present(nt_bgc_Fed_in)) then
667 4222 : nsiz = size(nt_bgc_Fed_in)
668 4222 : if (size(nt_bgc_Fed) < nsiz) then
669 0 : call icepack_warnings_add(subname//'error in nt_bgc_Fed size')
670 0 : call icepack_warnings_setabort(.true.,__FILE__,__LINE__)
671 : else
672 12666 : nt_bgc_Fed(1:nsiz) = nt_bgc_Fed_in(1:nsiz)
673 : endif
674 : endif
675 :
676 8444 : if (present(nlt_bgc_Fed_in)) then
677 4222 : nsiz = size(nlt_bgc_Fed_in)
678 4222 : if (size(nlt_bgc_Fed) < nsiz) then
679 0 : call icepack_warnings_add(subname//'error in nlt_bgc_Fed size')
680 0 : call icepack_warnings_setabort(.true.,__FILE__,__LINE__)
681 : else
682 12666 : nlt_bgc_Fed(1:nsiz) = nlt_bgc_Fed_in(1:nsiz)
683 : endif
684 : endif
685 :
686 8444 : if (present(nt_bgc_Fep_in)) then
687 4222 : nsiz = size(nt_bgc_Fep_in)
688 4222 : if (size(nt_bgc_Fep) < nsiz) then
689 0 : call icepack_warnings_add(subname//'error in nt_bgc_Fep size')
690 0 : call icepack_warnings_setabort(.true.,__FILE__,__LINE__)
691 : else
692 12666 : nt_bgc_Fep(1:nsiz) = nt_bgc_Fep_in(1:nsiz)
693 : endif
694 : endif
695 :
696 8444 : if (present(nlt_bgc_Fep_in)) then
697 4222 : nsiz = size(nlt_bgc_Fep_in)
698 4222 : if (size(nlt_bgc_Fep) < nsiz) then
699 0 : call icepack_warnings_add(subname//'error in nlt_bgc_Fep size')
700 0 : call icepack_warnings_setabort(.true.,__FILE__,__LINE__)
701 : else
702 12666 : nlt_bgc_Fep(1:nsiz) = nlt_bgc_Fep_in(1:nsiz)
703 : endif
704 : endif
705 :
706 8444 : if (present(nt_zaero_in)) then
707 4222 : nsiz = size(nt_zaero_in)
708 4222 : if (size(nt_zaero) < nsiz) then
709 0 : call icepack_warnings_add(subname//'error in nt_zaero size')
710 0 : call icepack_warnings_setabort(.true.,__FILE__,__LINE__)
711 : else
712 29554 : nt_zaero(1:nsiz) = nt_zaero_in(1:nsiz)
713 : endif
714 : endif
715 :
716 8444 : if (present(nlt_zaero_in)) then
717 4222 : nsiz = size(nlt_zaero_in)
718 4222 : if (size(nlt_zaero) < nsiz) then
719 0 : call icepack_warnings_add(subname//'error in nlt_zaero size')
720 0 : call icepack_warnings_setabort(.true.,__FILE__,__LINE__)
721 : else
722 29554 : nlt_zaero(1:nsiz) = nlt_zaero_in(1:nsiz)
723 : endif
724 : endif
725 :
726 8444 : if (present(nlt_zaero_sw_in)) then
727 4222 : nsiz = size(nlt_zaero_sw_in)
728 4222 : if (size(nlt_zaero_sw) < nsiz) then
729 0 : call icepack_warnings_add(subname//'error in nlt_zaero_sw size')
730 0 : call icepack_warnings_setabort(.true.,__FILE__,__LINE__)
731 : else
732 29554 : nlt_zaero_sw(1:nsiz) = nlt_zaero_sw_in(1:nsiz)
733 : endif
734 : endif
735 :
736 8444 : end subroutine icepack_init_tracer_indices
737 :
738 : !=======================================================================
739 : !autodocument_start icepack_query_tracer_indices
740 : ! query the number of column tracer indices
741 :
742 125164759 : subroutine icepack_query_tracer_indices(&
743 : nt_Tsfc_out, nt_qice_out, nt_qsno_out, nt_sice_out, & ! LCOV_EXCL_LINE
744 : nt_fbri_out, nt_iage_out, nt_FY_out, & ! LCOV_EXCL_LINE
745 : nt_alvl_out, nt_vlvl_out, nt_apnd_out, nt_hpnd_out, nt_ipnd_out, & ! LCOV_EXCL_LINE
746 : nt_smice_out, nt_smliq_out, nt_rhos_out, nt_rsnw_out, & ! LCOV_EXCL_LINE
747 : nt_fsd_out, nt_isosno_out, nt_isoice_out, & ! LCOV_EXCL_LINE
748 250329518 : nt_aero_out, nt_zaero_out, nt_bgc_C_out, & ! LCOV_EXCL_LINE
749 500659036 : nt_bgc_N_out, nt_bgc_chl_out, nt_bgc_DOC_out, nt_bgc_DON_out, & ! LCOV_EXCL_LINE
750 375494277 : nt_bgc_DIC_out, nt_bgc_Fed_out, nt_bgc_Fep_out, nt_bgc_Nit_out, nt_bgc_Am_out, & ! LCOV_EXCL_LINE
751 : nt_bgc_Sil_out, nt_bgc_DMSPp_out, nt_bgc_DMSPd_out, nt_bgc_DMS_out, nt_bgc_hum_out, & ! LCOV_EXCL_LINE
752 500659036 : nt_bgc_PON_out, nlt_zaero_out, nlt_bgc_C_out, nlt_bgc_N_out, nlt_bgc_chl_out, & ! LCOV_EXCL_LINE
753 500659036 : nlt_bgc_DOC_out, nlt_bgc_DON_out, nlt_bgc_DIC_out, nlt_bgc_Fed_out, & ! LCOV_EXCL_LINE
754 125164759 : nlt_bgc_Fep_out, nlt_bgc_Nit_out, nlt_bgc_Am_out, nlt_bgc_Sil_out, & ! LCOV_EXCL_LINE
755 : nlt_bgc_DMSPp_out, nlt_bgc_DMSPd_out, nlt_bgc_DMS_out, nlt_bgc_hum_out, & ! LCOV_EXCL_LINE
756 : nlt_bgc_PON_out, nt_zbgc_frac_out, nt_bgc_S_out, nlt_chl_sw_out, & ! LCOV_EXCL_LINE
757 125164759 : nlt_zaero_sw_out, & ! LCOV_EXCL_LINE
758 125164759 : bio_index_o_out, bio_index_out)
759 :
760 : integer, intent(out), optional :: &
761 : nt_Tsfc_out, & ! ice/snow temperature ! LCOV_EXCL_LINE
762 : nt_qice_out, & ! volume-weighted ice enthalpy (in layers) ! LCOV_EXCL_LINE
763 : nt_qsno_out, & ! volume-weighted snow enthalpy (in layers) ! LCOV_EXCL_LINE
764 : nt_sice_out, & ! volume-weighted ice bulk salinity (CICE grid layers) ! LCOV_EXCL_LINE
765 : nt_fbri_out, & ! volume fraction of ice with dynamic salt (hinS/vicen*aicen) ! LCOV_EXCL_LINE
766 : nt_iage_out, & ! volume-weighted ice age ! LCOV_EXCL_LINE
767 : nt_FY_out, & ! area-weighted first-year ice area ! LCOV_EXCL_LINE
768 : nt_alvl_out, & ! level ice area fraction ! LCOV_EXCL_LINE
769 : nt_vlvl_out, & ! level ice volume fraction ! LCOV_EXCL_LINE
770 : nt_apnd_out, & ! melt pond area fraction ! LCOV_EXCL_LINE
771 : nt_hpnd_out, & ! melt pond depth ! LCOV_EXCL_LINE
772 : nt_ipnd_out, & ! melt pond refrozen lid thickness ! LCOV_EXCL_LINE
773 : nt_smice_out,& ! mass of ice in snow ! LCOV_EXCL_LINE
774 : nt_smliq_out,& ! mass of liquid water in snow ! LCOV_EXCL_LINE
775 : nt_rhos_out, & ! snow density ! LCOV_EXCL_LINE
776 : nt_rsnw_out, & ! snow grain radius ! LCOV_EXCL_LINE
777 : nt_fsd_out, & ! floe size distribution ! LCOV_EXCL_LINE
778 : nt_isosno_out, & ! starting index for isotopes in snow ! LCOV_EXCL_LINE
779 : nt_isoice_out, & ! starting index for isotopes in ice ! LCOV_EXCL_LINE
780 : nt_aero_out, & ! starting index for aerosols in ice ! LCOV_EXCL_LINE
781 : nt_bgc_Nit_out, & ! nutrients ! LCOV_EXCL_LINE
782 : nt_bgc_Am_out, & ! ! LCOV_EXCL_LINE
783 : nt_bgc_Sil_out, & ! ! LCOV_EXCL_LINE
784 : nt_bgc_DMSPp_out,&! trace gases (skeletal layer) ! LCOV_EXCL_LINE
785 : nt_bgc_DMSPd_out,&! ! LCOV_EXCL_LINE
786 : nt_bgc_DMS_out, & ! ! LCOV_EXCL_LINE
787 : nt_bgc_hum_out, & ! ! LCOV_EXCL_LINE
788 : nt_bgc_PON_out, & ! zooplankton and detritus ! LCOV_EXCL_LINE
789 : nlt_bgc_Nit_out,& ! nutrients ! LCOV_EXCL_LINE
790 : nlt_bgc_Am_out, & ! ! LCOV_EXCL_LINE
791 : nlt_bgc_Sil_out,& ! ! LCOV_EXCL_LINE
792 : nlt_bgc_DMSPp_out,&! trace gases (skeletal layer) ! LCOV_EXCL_LINE
793 : nlt_bgc_DMSPd_out,&! ! LCOV_EXCL_LINE
794 : nlt_bgc_DMS_out,& ! ! LCOV_EXCL_LINE
795 : nlt_bgc_hum_out,& ! ! LCOV_EXCL_LINE
796 : nlt_bgc_PON_out,& ! zooplankton and detritus ! LCOV_EXCL_LINE
797 : nt_zbgc_frac_out,&! fraction of tracer in the mobile phase ! LCOV_EXCL_LINE
798 : nt_bgc_S_out, & ! (deprecated, was related to zsalinity) ! LCOV_EXCL_LINE
799 : nlt_chl_sw_out ! points to total chla in trcrn_sw
800 :
801 : integer (kind=int_kind), dimension(:), intent(out), optional :: &
802 : bio_index_o_out, & ! LCOV_EXCL_LINE
803 : bio_index_out
804 :
805 : integer (kind=int_kind), dimension(:), intent(out), optional :: &
806 : nt_bgc_N_out , & ! diatoms, phaeocystis, pico/small ! LCOV_EXCL_LINE
807 : nt_bgc_C_out , & ! diatoms, phaeocystis, pico/small ! LCOV_EXCL_LINE
808 : nt_bgc_chl_out, & ! diatoms, phaeocystis, pico/small ! LCOV_EXCL_LINE
809 : nlt_bgc_N_out , & ! diatoms, phaeocystis, pico/small ! LCOV_EXCL_LINE
810 : nlt_bgc_C_out , & ! diatoms, phaeocystis, pico/small ! LCOV_EXCL_LINE
811 : nlt_bgc_chl_out ! diatoms, phaeocystis, pico/small
812 :
813 : integer (kind=int_kind), dimension(:), intent(out), optional :: &
814 : nt_bgc_DOC_out, & ! dissolved organic carbon ! LCOV_EXCL_LINE
815 : nlt_bgc_DOC_out ! dissolved organic carbon
816 :
817 : integer (kind=int_kind), dimension(:), intent(out), optional :: &
818 : nt_bgc_DON_out, & ! dissolved organic nitrogen ! LCOV_EXCL_LINE
819 : nlt_bgc_DON_out ! dissolved organic nitrogen
820 :
821 : integer (kind=int_kind), dimension(:), intent(out), optional :: &
822 : nt_bgc_DIC_out, & ! dissolved inorganic carbon ! LCOV_EXCL_LINE
823 : nlt_bgc_DIC_out ! dissolved inorganic carbon
824 :
825 : integer (kind=int_kind), dimension(:), intent(out), optional :: &
826 : nt_bgc_Fed_out, & ! dissolved iron ! LCOV_EXCL_LINE
827 : nt_bgc_Fep_out, & ! particulate iron ! LCOV_EXCL_LINE
828 : nlt_bgc_Fed_out,& ! dissolved iron ! LCOV_EXCL_LINE
829 : nlt_bgc_Fep_out ! particulate iron
830 :
831 : integer (kind=int_kind), dimension(:), intent(out), optional :: &
832 : nt_zaero_out, & ! black carbon and other aerosols ! LCOV_EXCL_LINE
833 : nlt_zaero_out, & ! black carbon and other aerosols ! LCOV_EXCL_LINE
834 : nlt_zaero_sw_out ! black carbon and dust in trcrn_sw
835 :
836 : !autodocument_end
837 :
838 : character(len=*),parameter :: subname='(icepack_query_tracer_indices)'
839 :
840 125164759 : if (present(nt_Tsfc_out)) nt_Tsfc_out = nt_Tsfc
841 125164759 : if (present(nt_qice_out)) nt_qice_out = nt_qice
842 125164759 : if (present(nt_qsno_out)) nt_qsno_out = nt_qsno
843 125164759 : if (present(nt_sice_out)) nt_sice_out = nt_sice
844 125164759 : if (present(nt_fbri_out)) nt_fbri_out = nt_fbri
845 125164759 : if (present(nt_iage_out)) nt_iage_out = nt_iage
846 125164759 : if (present(nt_FY_out) ) nt_FY_out = nt_FY
847 125164759 : if (present(nt_alvl_out)) nt_alvl_out = nt_alvl
848 125164759 : if (present(nt_vlvl_out)) nt_vlvl_out = nt_vlvl
849 125164759 : if (present(nt_apnd_out)) nt_apnd_out = nt_apnd
850 125164759 : if (present(nt_hpnd_out)) nt_hpnd_out = nt_hpnd
851 125164759 : if (present(nt_ipnd_out)) nt_ipnd_out = nt_ipnd
852 125164759 : if (present(nt_fsd_out) ) nt_fsd_out = nt_fsd
853 125164759 : if (present(nt_smice_out) ) nt_smice_out = nt_smice
854 125164759 : if (present(nt_smliq_out) ) nt_smliq_out = nt_smliq
855 125164759 : if (present(nt_rhos_out) ) nt_rhos_out = nt_rhos
856 125164759 : if (present(nt_rsnw_out) ) nt_rsnw_out = nt_rsnw
857 125164759 : if (present(nt_isosno_out) ) nt_isosno_out = nt_isosno
858 125164759 : if (present(nt_isoice_out) ) nt_isoice_out = nt_isoice
859 125164759 : if (present(nt_aero_out) ) nt_aero_out = nt_aero
860 125164759 : if (present(nt_bgc_Nit_out) ) nt_bgc_Nit_out = nt_bgc_Nit
861 125164759 : if (present(nt_bgc_Am_out) ) nt_bgc_Am_out = nt_bgc_Am
862 125164759 : if (present(nt_bgc_Sil_out) ) nt_bgc_Sil_out = nt_bgc_Sil
863 125164759 : if (present(nt_bgc_DMSPp_out) ) nt_bgc_DMSPp_out = nt_bgc_DMSPp
864 125164759 : if (present(nt_bgc_DMSPd_out) ) nt_bgc_DMSPd_out = nt_bgc_DMSPd
865 125164759 : if (present(nt_bgc_DMS_out) ) nt_bgc_DMS_out = nt_bgc_DMS
866 125164759 : if (present(nt_bgc_hum_out) ) nt_bgc_hum_out = nt_bgc_hum
867 125164759 : if (present(nt_bgc_PON_out) ) nt_bgc_PON_out = nt_bgc_PON
868 125164759 : if (present(nlt_bgc_Nit_out) ) nlt_bgc_Nit_out = nlt_bgc_Nit
869 125164759 : if (present(nlt_bgc_Am_out) ) nlt_bgc_Am_out = nlt_bgc_Am
870 125164759 : if (present(nlt_bgc_Sil_out) ) nlt_bgc_Sil_out = nlt_bgc_Sil
871 125164759 : if (present(nlt_bgc_DMSPp_out)) nlt_bgc_DMSPp_out = nlt_bgc_DMSPp
872 125164759 : if (present(nlt_bgc_DMSPd_out)) nlt_bgc_DMSPd_out = nlt_bgc_DMSPd
873 125164759 : if (present(nlt_bgc_DMS_out) ) nlt_bgc_DMS_out = nlt_bgc_DMS
874 125164759 : if (present(nlt_bgc_hum_out) ) nlt_bgc_hum_out = nlt_bgc_hum
875 125164759 : if (present(nlt_bgc_PON_out) ) nlt_bgc_PON_out = nlt_bgc_PON
876 125164759 : if (present(nlt_chl_sw_out) ) nlt_chl_sw_out = nlt_chl_sw
877 125164759 : if (present(nt_zbgc_frac_out) ) nt_zbgc_frac_out = nt_zbgc_frac
878 125164759 : if (present(nt_bgc_S_out) ) nt_bgc_S_out = nt_bgc_S
879 :
880 417995623 : if (present(bio_index_o_out) ) bio_index_o_out = bio_index_o
881 125164759 : if (present(bio_index_out) ) bio_index_out = bio_index
882 186003670 : if (present(nt_bgc_N_out) ) nt_bgc_N_out = nt_bgc_N
883 155696218 : if (present(nlt_bgc_N_out) ) nlt_bgc_N_out = nlt_bgc_N
884 155674465 : if (present(nt_bgc_C_out) ) nt_bgc_C_out = nt_bgc_C
885 155672527 : if (present(nlt_bgc_C_out) ) nlt_bgc_C_out = nlt_bgc_C
886 155687131 : if (present(nt_bgc_chl_out) ) nt_bgc_chl_out = nt_bgc_chl
887 155685193 : if (present(nlt_bgc_chl_out) ) nlt_bgc_chl_out = nlt_bgc_chl
888 155698156 : if (present(nt_bgc_DOC_out) ) nt_bgc_DOC_out = nt_bgc_DOC
889 155696218 : if (present(nlt_bgc_DOC_out) ) nlt_bgc_DOC_out = nlt_bgc_DOC
890 135342558 : if (present(nt_bgc_DON_out) ) nt_bgc_DON_out = nt_bgc_DON
891 135341912 : if (present(nlt_bgc_DON_out) ) nlt_bgc_DON_out = nlt_bgc_DON
892 135338883 : if (present(nt_bgc_DIC_out) ) nt_bgc_DIC_out = nt_bgc_DIC
893 135338237 : if (present(nlt_bgc_DIC_out) ) nlt_bgc_DIC_out = nlt_bgc_DIC
894 145520357 : if (present(nt_bgc_Fed_out) ) nt_bgc_Fed_out = nt_bgc_Fed
895 145519065 : if (present(nlt_bgc_Fed_out) ) nlt_bgc_Fed_out = nlt_bgc_Fed
896 145520357 : if (present(nt_bgc_Fep_out) ) nt_bgc_Fep_out = nt_bgc_Fep
897 145519065 : if (present(nlt_bgc_Fep_out) ) nlt_bgc_Fep_out = nlt_bgc_Fep
898 246842581 : if (present(nt_zaero_out) ) nt_zaero_out = nt_zaero
899 247143853 : if (present(nlt_zaero_out) ) nlt_zaero_out = nlt_zaero
900 246813373 : if (present(nlt_zaero_sw_out)) nlt_zaero_sw_out = nlt_zaero_sw
901 :
902 125164759 : end subroutine icepack_query_tracer_indices
903 :
904 : !=======================================================================
905 : !autodocument_start icepack_write_tracer_indices
906 : ! write the number of column tracer indices
907 :
908 375 : subroutine icepack_write_tracer_indices(iounit)
909 :
910 : integer, intent(in) :: iounit
911 :
912 : !autodocument_end
913 :
914 : ! local
915 : integer (kind=int_kind) :: k
916 : character(len=*),parameter :: subname='(icepack_write_tracer_indices)'
917 :
918 375 : write(iounit,*) subname//":"
919 375 : write(iounit,*) " nt_Tsfc = ",nt_Tsfc
920 375 : write(iounit,*) " nt_qice = ",nt_qice
921 375 : write(iounit,*) " nt_qsno = ",nt_qsno
922 375 : write(iounit,*) " nt_sice = ",nt_sice
923 375 : write(iounit,*) " nt_fbri = ",nt_fbri
924 375 : write(iounit,*) " nt_iage = ",nt_iage
925 375 : write(iounit,*) " nt_FY = ",nt_FY
926 375 : write(iounit,*) " nt_alvl = ",nt_alvl
927 375 : write(iounit,*) " nt_vlvl = ",nt_vlvl
928 375 : write(iounit,*) " nt_apnd = ",nt_apnd
929 375 : write(iounit,*) " nt_hpnd = ",nt_hpnd
930 375 : write(iounit,*) " nt_ipnd = ",nt_ipnd
931 375 : write(iounit,*) " nt_fsd = ",nt_fsd
932 375 : write(iounit,*) " nt_smice = ",nt_smice
933 375 : write(iounit,*) " nt_smliq = ",nt_smliq
934 375 : write(iounit,*) " nt_rhos = ",nt_rhos
935 375 : write(iounit,*) " nt_rsnw = ",nt_rsnw
936 375 : write(iounit,*) " nt_isosno = ",nt_isosno
937 375 : write(iounit,*) " nt_isoice = ",nt_isoice
938 375 : write(iounit,*) " nt_aero = ",nt_aero
939 375 : write(iounit,*) " nt_bgc_Nit = ",nt_bgc_Nit
940 375 : write(iounit,*) " nt_bgc_Am = ",nt_bgc_Am
941 375 : write(iounit,*) " nt_bgc_Sil = ",nt_bgc_Sil
942 375 : write(iounit,*) " nt_bgc_DMSPp = ",nt_bgc_DMSPp
943 375 : write(iounit,*) " nt_bgc_DMSPd = ",nt_bgc_DMSPd
944 375 : write(iounit,*) " nt_bgc_DMS = ",nt_bgc_DMS
945 375 : write(iounit,*) " nt_bgc_hum = ",nt_bgc_hum
946 375 : write(iounit,*) " nt_bgc_PON = ",nt_bgc_PON
947 375 : write(iounit,*) " nlt_bgc_Nit = ",nlt_bgc_Nit
948 375 : write(iounit,*) " nlt_bgc_Am = ",nlt_bgc_Am
949 375 : write(iounit,*) " nlt_bgc_Sil = ",nlt_bgc_Sil
950 375 : write(iounit,*) " nlt_bgc_DMSPp = ",nlt_bgc_DMSPp
951 375 : write(iounit,*) " nlt_bgc_DMSPd = ",nlt_bgc_DMSPd
952 375 : write(iounit,*) " nlt_bgc_DMS = ",nlt_bgc_DMS
953 375 : write(iounit,*) " nlt_bgc_hum = ",nlt_bgc_hum
954 375 : write(iounit,*) " nlt_bgc_PON = ",nlt_bgc_PON
955 375 : write(iounit,*) " nlt_chl_sw = ",nlt_chl_sw
956 375 : write(iounit,*) " nt_zbgc_frac = ",nt_zbgc_frac
957 375 : write(iounit,*) " nt_bgc_S = ",nt_bgc_S," (deprecated)"
958 :
959 375 : write(iounit,*) " max_nbtrcr = ",max_nbtrcr
960 11250 : do k = 1, max_nbtrcr
961 10875 : write(iounit,*) " bio_index_o(k) = ",k,bio_index_o(k)
962 11250 : write(iounit,*) " bio_index(k) = ",k,bio_index(k)
963 : enddo
964 :
965 375 : write(iounit,*) " max_algae = ",max_algae
966 1500 : do k = 1, max_algae
967 1125 : write(iounit,*) " nt_bgc_N(k) = ",k,nt_bgc_N(k)
968 1125 : write(iounit,*) " nlt_bgc_N(k) = ",k,nlt_bgc_N(k)
969 1125 : write(iounit,*) " nt_bgc_C(k) = ",k,nt_bgc_C(k)
970 1125 : write(iounit,*) " nlt_bgc_C(k) = ",k,nlt_bgc_C(k)
971 1125 : write(iounit,*) " nt_bgc_chl(k) = ",k,nt_bgc_chl(k)
972 1500 : write(iounit,*) " nlt_bgc_chl(k) = ",k,nlt_bgc_chl(k)
973 : enddo
974 :
975 375 : write(iounit,*) " max_DOC = ",max_DOC
976 1500 : do k = 1, max_DOC
977 1125 : write(iounit,*) " nt_bgc_DOC(k) = ",k,nt_bgc_DOC(k)
978 1500 : write(iounit,*) " nlt_bgc_DOC(k) = ",k,nlt_bgc_DOC(k)
979 : enddo
980 :
981 375 : write(iounit,*) " max_DON = ",max_DON
982 750 : do k = 1, max_DON
983 375 : write(iounit,*) " nt_bgc_DON(k) = ",k,nt_bgc_DON(k)
984 750 : write(iounit,*) " nlt_bgc_DON(k) = ",k,nlt_bgc_DON(k)
985 : enddo
986 :
987 375 : write(iounit,*) " max_DIC = ",max_DIC
988 750 : do k = 1, max_DIC
989 375 : write(iounit,*) " nt_bgc_DIC(k) = ",k,nt_bgc_DIC(k)
990 750 : write(iounit,*) " nlt_bgc_DIC(k) = ",k,nlt_bgc_DIC(k)
991 : enddo
992 :
993 375 : write(iounit,*) " max_fe = ",max_fe
994 1125 : do k = 1, max_fe
995 750 : write(iounit,*) " nt_bgc_Fed(k) = ",k,nt_bgc_Fed(k)
996 750 : write(iounit,*) " nlt_bgc_Fed(k) = ",k,nlt_bgc_Fed(k)
997 750 : write(iounit,*) " nt_bgc_Fep(k) = ",k,nt_bgc_Fep(k)
998 1125 : write(iounit,*) " nlt_bgc_Fep(k) = ",k,nlt_bgc_Fep(k)
999 : enddo
1000 :
1001 375 : write(iounit,*) " max_aero = ",max_aero
1002 2625 : do k = 1, max_aero
1003 2250 : write(iounit,*) " nt_zaero(k) = ",k,nt_zaero(k)
1004 2250 : write(iounit,*) " nlt_zaero(k) = ",k,nlt_zaero(k)
1005 2625 : write(iounit,*) " nlt_zaero_sw(k) = ",k,nlt_zaero_sw(k)
1006 : enddo
1007 :
1008 375 : end subroutine icepack_write_tracer_indices
1009 :
1010 : !=======================================================================
1011 : !autodocument_start icepack_init_tracer_sizes
1012 : ! set the number of column tracers
1013 :
1014 12666 : subroutine icepack_init_tracer_sizes(&
1015 : ncat_in, nilyr_in, nslyr_in, nblyr_in, nfsd_in , & ! LCOV_EXCL_LINE
1016 : n_algae_in, n_DOC_in, n_aero_in, n_iso_in, & ! LCOV_EXCL_LINE
1017 : n_DON_in, n_DIC_in, n_fed_in, n_fep_in, n_zaero_in, & ! LCOV_EXCL_LINE
1018 : ntrcr_in, ntrcr_o_in, nbtrcr_in, nbtrcr_sw_in)
1019 :
1020 : integer (kind=int_kind), intent(in), optional :: &
1021 : ncat_in , & ! Categories ! LCOV_EXCL_LINE
1022 : nfsd_in , & ! ! LCOV_EXCL_LINE
1023 : nilyr_in , & ! Layers ! LCOV_EXCL_LINE
1024 : nslyr_in , & ! ! LCOV_EXCL_LINE
1025 : nblyr_in , & ! ! LCOV_EXCL_LINE
1026 : n_algae_in, & ! Dimensions ! LCOV_EXCL_LINE
1027 : n_DOC_in , & ! ! LCOV_EXCL_LINE
1028 : n_DON_in , & ! ! LCOV_EXCL_LINE
1029 : n_DIC_in , & ! ! LCOV_EXCL_LINE
1030 : n_fed_in , & ! ! LCOV_EXCL_LINE
1031 : n_fep_in , & ! ! LCOV_EXCL_LINE
1032 : n_zaero_in, & ! ! LCOV_EXCL_LINE
1033 : n_iso_in , & ! ! LCOV_EXCL_LINE
1034 : n_aero_in , & ! ! LCOV_EXCL_LINE
1035 : ntrcr_in , & ! number of tracers in use ! LCOV_EXCL_LINE
1036 : ntrcr_o_in, & ! number of non-bio tracers in use ! LCOV_EXCL_LINE
1037 : nbtrcr_in , & ! number of bio tracers in use ! LCOV_EXCL_LINE
1038 : nbtrcr_sw_in ! number of shortwave bio tracers in use
1039 :
1040 : !autodocument_end
1041 :
1042 : character(len=*),parameter :: subname='(icepack_init_tracer_sizes)'
1043 :
1044 12666 : if (present(ncat_in) ) ncat = ncat_in
1045 12666 : if (present(nilyr_in) ) nilyr = nilyr_in
1046 12666 : if (present(nslyr_in) ) nslyr = nslyr_in
1047 12666 : if (present(nblyr_in) ) nblyr = nblyr_in
1048 12666 : if (present(nfsd_in) ) nfsd = nfsd_in
1049 :
1050 12666 : if (present(n_algae_in) ) n_algae = n_algae_in
1051 12666 : if (present(n_DOC_in) ) n_DOC = n_DOC_in
1052 12666 : if (present(n_DON_in) ) n_DON = n_DON_in
1053 12666 : if (present(n_DIC_in) ) n_DIC = n_DIC_in
1054 12666 : if (present(n_fed_in) ) n_fed = n_fed_in
1055 12666 : if (present(n_fep_in) ) n_fep = n_fep_in
1056 12666 : if (present(n_zaero_in) ) n_zaero = n_zaero_in
1057 12666 : if (present(n_iso_in) ) n_iso = n_iso_in
1058 12666 : if (present(n_aero_in) ) n_aero = n_aero_in
1059 :
1060 12666 : if (present(ntrcr_in) ) ntrcr = ntrcr_in
1061 12666 : if (present(ntrcr_o_in) ) ntrcr_o = ntrcr_o_in
1062 12666 : if (present(nbtrcr_in) ) nbtrcr = nbtrcr_in
1063 12666 : if (present(nbtrcr_sw_in)) nbtrcr_sw = nbtrcr_sw_in
1064 :
1065 12666 : end subroutine icepack_init_tracer_sizes
1066 :
1067 : !=======================================================================
1068 : !autodocument_start icepack_query_tracer_sizes
1069 : ! query the number of column tracers
1070 :
1071 64983045 : subroutine icepack_query_tracer_sizes(&
1072 : max_algae_out , max_dic_out , max_doc_out , & ! LCOV_EXCL_LINE
1073 : max_don_out , max_fe_out , nmodal1_out , & ! LCOV_EXCL_LINE
1074 : nmodal2_out , max_aero_out , max_nbtrcr_out , & ! LCOV_EXCL_LINE
1075 : ncat_out, nilyr_out, nslyr_out, nblyr_out, nfsd_out, & ! LCOV_EXCL_LINE
1076 : n_algae_out, n_DOC_out, n_aero_out, n_iso_out, & ! LCOV_EXCL_LINE
1077 : n_DON_out, n_DIC_out, n_fed_out, n_fep_out, n_zaero_out, & ! LCOV_EXCL_LINE
1078 : ntrcr_out, ntrcr_o_out, nbtrcr_out, nbtrcr_sw_out)
1079 :
1080 : integer (kind=int_kind), intent(out), optional :: &
1081 : max_algae_out , & ! maximum number of algal types ! LCOV_EXCL_LINE
1082 : max_dic_out , & ! maximum number of dissolved inorganic carbon types ! LCOV_EXCL_LINE
1083 : max_doc_out , & ! maximum number of dissolved organic carbon types ! LCOV_EXCL_LINE
1084 : max_don_out , & ! maximum number of dissolved organic nitrogen types ! LCOV_EXCL_LINE
1085 : max_fe_out , & ! maximum number of iron types ! LCOV_EXCL_LINE
1086 : nmodal1_out , & ! dimension for modal aerosol radiation parameters ! LCOV_EXCL_LINE
1087 : nmodal2_out , & ! dimension for modal aerosol radiation parameters ! LCOV_EXCL_LINE
1088 : max_aero_out , & ! maximum number of aerosols ! LCOV_EXCL_LINE
1089 : max_nbtrcr_out ! algal nitrogen and chlorophyll
1090 :
1091 : integer (kind=int_kind), intent(out), optional :: &
1092 : ncat_out , & ! Categories ! LCOV_EXCL_LINE
1093 : nfsd_out , & ! ! LCOV_EXCL_LINE
1094 : nilyr_out , & ! Layers ! LCOV_EXCL_LINE
1095 : nslyr_out , & ! ! LCOV_EXCL_LINE
1096 : nblyr_out , & ! ! LCOV_EXCL_LINE
1097 : n_algae_out, & ! Dimensions ! LCOV_EXCL_LINE
1098 : n_DOC_out , & ! ! LCOV_EXCL_LINE
1099 : n_DON_out , & ! ! LCOV_EXCL_LINE
1100 : n_DIC_out , & ! ! LCOV_EXCL_LINE
1101 : n_fed_out , & ! ! LCOV_EXCL_LINE
1102 : n_fep_out , & ! ! LCOV_EXCL_LINE
1103 : n_zaero_out, & ! ! LCOV_EXCL_LINE
1104 : n_iso_out , & ! ! LCOV_EXCL_LINE
1105 : n_aero_out , & ! ! LCOV_EXCL_LINE
1106 : ntrcr_out , & ! number of tracers in use ! LCOV_EXCL_LINE
1107 : ntrcr_o_out, & ! number of non-bio tracers in use ! LCOV_EXCL_LINE
1108 : nbtrcr_out , & ! number of bio tracers in use ! LCOV_EXCL_LINE
1109 : nbtrcr_sw_out ! number of shortwave bio tracers in use
1110 :
1111 : !autodocument_end
1112 :
1113 : character(len=*),parameter :: subname='(icepack_query_tracer_sizes)'
1114 :
1115 64983045 : if (present(max_algae_out)) max_algae_out = max_algae
1116 64983045 : if (present(max_dic_out)) max_dic_out = max_dic
1117 64983045 : if (present(max_doc_out)) max_doc_out = max_doc
1118 64983045 : if (present(max_don_out)) max_don_out = max_don
1119 64983045 : if (present(max_fe_out)) max_fe_out = max_fe
1120 64983045 : if (present(nmodal1_out)) nmodal1_out = nmodal1
1121 64983045 : if (present(nmodal2_out)) nmodal2_out = nmodal2
1122 64983045 : if (present(max_aero_out)) max_aero_out = max_aero
1123 64983045 : if (present(max_nbtrcr_out)) max_nbtrcr_out= max_nbtrcr
1124 :
1125 64983045 : if (present(ncat_out) ) ncat_out = ncat
1126 64983045 : if (present(nilyr_out) ) nilyr_out = nilyr
1127 64983045 : if (present(nslyr_out) ) nslyr_out = nslyr
1128 64983045 : if (present(nblyr_out) ) nblyr_out = nblyr
1129 64983045 : if (present(nfsd_out) ) nfsd_out = nfsd
1130 :
1131 64983045 : if (present(n_algae_out) ) n_algae_out = n_algae
1132 64983045 : if (present(n_DOC_out) ) n_DOC_out = n_DOC
1133 64983045 : if (present(n_DON_out) ) n_DON_out = n_DON
1134 64983045 : if (present(n_DIC_out) ) n_DIC_out = n_DIC
1135 64983045 : if (present(n_fed_out) ) n_fed_out = n_fed
1136 64983045 : if (present(n_fep_out) ) n_fep_out = n_fep
1137 64983045 : if (present(n_zaero_out) ) n_zaero_out = n_zaero
1138 64983045 : if (present(n_aero_out) ) n_aero_out = n_aero
1139 64983045 : if (present(n_iso_out) ) n_iso_out = n_iso
1140 :
1141 64983045 : if (present(ntrcr_out) ) ntrcr_out = ntrcr
1142 64983045 : if (present(ntrcr_o_out) ) ntrcr_o_out = ntrcr_o
1143 64983045 : if (present(nbtrcr_out) ) nbtrcr_out = nbtrcr
1144 64983045 : if (present(nbtrcr_sw_out)) nbtrcr_sw_out = nbtrcr_sw
1145 :
1146 64983045 : end subroutine icepack_query_tracer_sizes
1147 :
1148 : !=======================================================================
1149 : !autodocument_start icepack_write_tracer_sizes
1150 : ! write the number of column tracers
1151 :
1152 375 : subroutine icepack_write_tracer_sizes(iounit)
1153 :
1154 : integer (kind=int_kind), intent(in) :: iounit
1155 :
1156 : !autodocument_end
1157 :
1158 : character(len=*),parameter :: subname='(icepack_write_tracer_sizes)'
1159 :
1160 375 : write(iounit,*) subname//":"
1161 375 : write(iounit,*) " fixed parameters: "
1162 375 : write(iounit,*) " max_algae_out =", max_algae
1163 375 : write(iounit,*) " max_dic_out =", max_dic
1164 375 : write(iounit,*) " max_doc_out =", max_doc
1165 375 : write(iounit,*) " max_don_out =", max_don
1166 375 : write(iounit,*) " max_fe_out =", max_fe
1167 375 : write(iounit,*) " nmodal1_out =", nmodal1
1168 375 : write(iounit,*) " nmodal2_out =", nmodal2
1169 375 : write(iounit,*) " max_iso_out =", max_iso
1170 375 : write(iounit,*) " max_aero_out =", max_aero
1171 375 : write(iounit,*) " max_nbtrcr_out=", max_nbtrcr
1172 :
1173 375 : write(iounit,*) " model defined parameters: "
1174 375 : write(iounit,*) " ncat = ",ncat
1175 375 : write(iounit,*) " nilyr = ",nilyr
1176 375 : write(iounit,*) " nslyr = ",nslyr
1177 375 : write(iounit,*) " nblyr = ",nblyr
1178 375 : write(iounit,*) " nfsd = ",nfsd
1179 375 : write(iounit,*) " n_algae = ",n_algae
1180 375 : write(iounit,*) " n_DOC = ",n_DOC
1181 375 : write(iounit,*) " n_DON = ",n_DON
1182 375 : write(iounit,*) " n_DIC = ",n_DIC
1183 375 : write(iounit,*) " n_fed = ",n_fed
1184 375 : write(iounit,*) " n_fep = ",n_fep
1185 375 : write(iounit,*) " n_zaero = ",n_zaero
1186 375 : write(iounit,*) " n_aero = ",n_aero
1187 375 : write(iounit,*) " n_iso = ",n_iso
1188 375 : write(iounit,*) " ntrcr = ",ntrcr
1189 375 : write(iounit,*) " ntrcr_o = ",ntrcr_o
1190 375 : write(iounit,*) " nbtrcr = ",nbtrcr
1191 375 : write(iounit,*) " nbtrcr_sw = ",nbtrcr_sw
1192 :
1193 375 : end subroutine icepack_write_tracer_sizes
1194 :
1195 : !=======================================================================
1196 : !autodocument_start icepack_compute_tracers
1197 : ! Compute tracer fields.
1198 : ! Given atrcrn = aicen*trcrn (or vicen*trcrn, vsnon*trcrn), compute trcrn.
1199 :
1200 0 : subroutine icepack_compute_tracers (trcr_depend, &
1201 0 : atrcrn, aicen, & ! LCOV_EXCL_LINE
1202 : vicen, vsnon, & ! LCOV_EXCL_LINE
1203 29459452580 : trcr_base, n_trcr_strata, & ! LCOV_EXCL_LINE
1204 29459452580 : nt_strata, trcrn, Tf)
1205 :
1206 : integer (kind=int_kind), dimension (:), intent(in) :: &
1207 : trcr_depend, & ! = 0 for aicen tracers, 1 for vicen, 2 for vsnon ! LCOV_EXCL_LINE
1208 : n_trcr_strata ! number of underlying tracer layers
1209 :
1210 : real (kind=dbl_kind), dimension (:,:), intent(in) :: &
1211 : trcr_base ! = 0 or 1 depending on tracer dependency
1212 : ! argument 2: (1) aice, (2) vice, (3) vsno
1213 :
1214 : integer (kind=int_kind), dimension (:,:), intent(in) :: &
1215 : nt_strata ! indices of underlying tracer layers
1216 :
1217 : real (kind=dbl_kind), dimension (:), intent(in) :: &
1218 : atrcrn ! aicen*trcrn or vicen*trcrn or vsnon*trcrn
1219 :
1220 : real (kind=dbl_kind), intent(in) :: &
1221 : aicen , & ! concentration of ice ! LCOV_EXCL_LINE
1222 : vicen , & ! volume per unit area of ice (m) ! LCOV_EXCL_LINE
1223 : vsnon ! volume per unit area of snow (m)
1224 :
1225 : real (kind=dbl_kind), dimension (:), intent(out) :: &
1226 : trcrn ! ice tracers
1227 :
1228 : real (kind=dbl_kind), intent(in) :: &
1229 : Tf ! Freezing point
1230 :
1231 : !autodocument_end
1232 :
1233 : ! local variables
1234 :
1235 : integer (kind=int_kind) :: &
1236 : it, & ! tracer index ! LCOV_EXCL_LINE
1237 : itl, & ! tracer index ! LCOV_EXCL_LINE
1238 : ntr, & ! tracer index ! LCOV_EXCL_LINE
1239 : k ! loop index
1240 :
1241 : real (kind=dbl_kind), dimension(3) :: &
1242 : divisor ! base quantity on which tracers are carried
1243 :
1244 : real (kind=dbl_kind) :: &
1245 : work ! temporary scalar
1246 :
1247 : character(len=*),parameter :: subname='(icepack_compute_tracers)'
1248 :
1249 : !-----------------------------------------------------------------
1250 : ! Compute new tracers
1251 : !-----------------------------------------------------------------
1252 :
1253 >49377*10^7 : do it = 1, ntrcr
1254 >47904*10^7 : divisor(1) = trcr_base(it,1)*aicen
1255 >47904*10^7 : divisor(2) = trcr_base(it,2)*vicen
1256 >47904*10^7 : divisor(3) = trcr_base(it,3)*vsnon
1257 :
1258 >49377*10^7 : if (trcr_depend(it) == 0) then ! ice area tracers
1259 59865103937 : if (aicen > puny) then
1260 16291591487 : trcrn(it) = atrcrn(it) / aicen
1261 : else
1262 43573512450 : trcrn(it) = c0
1263 43573512450 : if (it == nt_Tsfc) then
1264 10666547314 : trcrn(it) = Tf ! surface temperature
1265 : endif
1266 : endif
1267 :
1268 : else
1269 :
1270 >41917*10^7 : work = c0
1271 >16767*10^8 : do k = 1, 3
1272 >16767*10^8 : if (divisor(k) > c0) then
1273 95579033823 : work = atrcrn(it) / divisor(k)
1274 : endif
1275 : enddo
1276 >41917*10^7 : trcrn(it) = work ! save it
1277 >41917*10^7 : if (n_trcr_strata(it) > 0) then ! additional tracer layers
1278 >11129*10^7 : do itl = 1, n_trcr_strata(it)
1279 69458567769 : ntr = nt_strata(it,itl)
1280 >11129*10^7 : if (trcrn(ntr) > c0) then
1281 14850820864 : trcrn(it) = trcrn(it) / trcrn(ntr)
1282 : else
1283 54607746905 : trcrn(it) = c0
1284 : endif
1285 : enddo
1286 : endif
1287 :
1288 : endif ! trcr_depend=0
1289 :
1290 : enddo
1291 :
1292 14729726290 : if (vicen <= c0 .and. tr_brine) trcrn(nt_fbri) = c1
1293 14729726290 : if (vsnon <= c0) then
1294 11147195945 : if (snwredist(1:3) == 'ITD') then
1295 344401476 : trcrn(nt_rhos :nt_rhos +nslyr-1) = rhosnew
1296 : endif
1297 11147195945 : if (snwgrain) then
1298 2993304438 : trcrn(nt_rsnw :nt_rsnw +nslyr-1) = rsnw_fall
1299 2993304438 : trcrn(nt_smice:nt_smice+nslyr-1) = rhos
1300 : endif
1301 : endif ! vsnon <= 0
1302 :
1303 14729726290 : end subroutine icepack_compute_tracers
1304 :
1305 : !=======================================================================
1306 :
1307 : end module icepack_tracers
1308 :
1309 : !=======================================================================
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